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Publications

by Admin — last modified Dec 13, 2012 08:56 AM
Publications concerning 2dx

Publications about 2dx by the developers
null Image Processing for 2D Crystal Images
    In: Electron Crystallography of Soluble and Membrane Proteins, Methods in Molecular Biology,  Vol. 955, Chapter 10, 171-194 (2012)

    M. Arheit, D. Castano-Diez, R. Thierry, B. R. Gipson, X. Zeng, and H. Stahlberg

No. 70

PDF (1 MB)
PubMed
Methods
null Merging of Image Data in Electron Crystallography
    In: Electron Crystallography of Soluble and Membrane Proteins, Methods in Molecular Biology,  Vol. 955, Chapter 11, 195-209 (2012)

    M. Arheit, D. Castano-Diez, R. Thierry, P. Abeyrathne, B. R. Gipson, and H. Stahlberg

No. 69

PDF (343 kB)
PubMed
Methods
null Automation of Image Processing in Electron Crystallography
    In: Electron Crystallography of Soluble and Membrane Proteins, Methods in Molecular Biology,  Vol. 955, Chapter 18, 313-330 (2012)

    M. Arheit, D. Castano-Diez, R. Thierry, B. R. Gipson, X. Zeng, and H. Stahlberg

No. 68

PDF (568 kB)
PubMed
Methods
null Automatic Recovery of Missing Amplitudes and Phases in Tilt-Limited Electron Crystallography of 2D Crystals
    Phys. Rev. E Stat. Nonlin. Soft Matter Phys., Vol 84(1-1):011916 (2011)

    B.R. Gipson, D.J. Masiel, N.D. Browning, J. Spence, K. Mitsuoka, and H. Stahlberg.

No. 65

PDF (1.2 MB)
PubMed
Phys.Rev.E
Suppl. Material
null 3D Reconstruction from 2D crystal image and diffraction data.
    Methods Enzymol. 482, Chapter 4, 101-129 (2010).

    Andreas D. Schenk, Daniel Castaño-Díez, Bryant Gipson, Marcel Arheit, Xiangyan Zeng, and Henning Stahlberg.

No. 62

PubMed
Methods
PDF (336 kB)
null 2dx - Automated 3D structure reconstruction from 2D crystal data
    Microscopy and Microanalysis 14(Suppl. 2), 1290-1291 (2008)

    Bryant Gipson, Xianyan Zeng, and Henning Stahlberg

No. 53

PDF (688 kB)
PubMed
Mic.&Microanal.
null A maximum likelihood approach to two-dimensional crystals
    J. Struct. Biol., 160(3), 362-374 (2007)

    Xiangyan Zeng, Henning Stahlberg, and Nikolaus Grigorieff

No. 45

PDF (1.6 MB)
PubMed
JSB
null 2dx_merge - Data management and merging for 2D crystal images
    J. Struct. Biol. 160(3), 375-384 (2007)

    Bryant Gipson, Xiangyan Zeng, and Henning Stahlberg

No. 44

PDF (1.7 MB)
PubMed
JSB
null Automatic lattice determination for two-dimensional crystal images
    J. Struct. Biol. 160(3), 353-361 (2007)

    Xiangyan Zeng, Bryant Gipson, Zi Yan Zheng, Ludovic Renault, and Henning Stahlberg

No. 43

PDF (1.1 MB)
PubMed
JSB
null 2dx - User-friendly image processing for 2D crystals
    J. Struct. Biol. 157 (2007) 64-72.

    Bryant Gipson, Xiangyan Zeng, Zi Yan Zhang, and Henning Stahlberg

No. 38

PDF (1.3 MB)
JSB
PubMed
null Milestones in electron crystallography
    J. Comp.-Aided Molec. Design 20, 519-527 (2006)

    Ludovic Renault, Hui-Ting Chou, Po-Lin Chiu, Rena M. Hill, Xiangyan Zeng, Bryant Gipson, Zi Yan Zhang, Anchi Cheng, Vinzenz Unger, and Henning Stahlberg

No. 33

PDF (313 kB)
JCAMD
PubMed

Publications about 2dx by others

null

 Application of two-dimensional crystallography and image processing to atomic resolution Z-contrast images
    J. of Electron Microscopy, in press (2009)

    David G. Morgan, Quentin M. Ramasse, and Nigel Browning

    This is a detailed manual for the usage of 2dx for Materials Sciences samples.

 

JElMic